Difference between control and Mdivi-1 treatment over time

15 August 2016

Genewise expression level

Spreadsheet, voom plot

3223 with fdr<=0.01

3964 with fdr<=0.05



Raw data format: FIL_1_rep1; FIL_2_rep1; FIL_3_rep1; FIL_4_rep1; FIL_5_rep1; FIL_6_rep1; INHIB_1_rep1; INHIB_2_rep1; INHIB_3_rep1; INHIB_4_rep1; INHIB_5_rep1; INHIB_6_rep1; FIL_1_rep2; FIL_2_rep2; FIL_3_rep2; FIL_4_rep2; FIL_5_rep2; FIL_6_rep2; INHIB_1_rep2; INHIB_2_rep2; INHIB_3_rep2; INHIB_4_rep2; INHIB_5_rep2; INHIB_6_rep2
5810 of 6219 features kept after filtering
(required at least one sample with 10 reads)
df = 6.456082
sd = 0.949283
noise combined p-value = 0.753114
noise fit score = 0.595330 bits

Design matrix

[----------------------------------------------] test coefficients
      0       0       0       0       0       0       1       0       0       0       0       0       0       0       0       0       0       0  FIL_1_rep1
      0       0       0       0       0       0       0       1       0       0       0       0       0       0       0       0       0       0  FIL_2_rep1
      0       0       0       0       0       0       0       0       1       0       0       0       0       0       0       0       0       0  FIL_3_rep1
      0       0       0       0       0       0       0       0       0       1       0       0       0       0       0       0       0       0  FIL_4_rep1
      0       0       0       0       0       0       0       0       0       0       1       0       0       0       0       0       0       0  FIL_5_rep1
      0       0       0       0       0       0       0       0       0       0       0       1       0       0       0       0       0       0  FIL_6_rep1
      1       0       0       0       0       0       1       0       0       0       0       0       0       0       0       0       0       0  INHIB_1_rep1
      0       1       0       0       0       0       0       1       0       0       0       0       0       0       0       0       0       0  INHIB_2_rep1
      0       0       1       0       0       0       0       0       1       0       0       0       0       0       0       0       0       0  INHIB_3_rep1
      0       0       0       1       0       0       0       0       0       1       0       0       0       0       0       0       0       0  INHIB_4_rep1
      0       0       0       0       1       0       0       0       0       0       1       0       0       0       0       0       0       0  INHIB_5_rep1
      0       0       0       0       0       1       0       0       0       0       0       1       0       0       0       0       0       0  INHIB_6_rep1
      0       0       0       0       0       0       1       0       0       0       0       0       1       0       0       0       0       0  FIL_1_rep2
      0       0       0       0       0       0       0       1       0       0       0       0       0       1       0       0       0       0  FIL_2_rep2
      0       0       0       0       0       0       0       0       1       0       0       0       0       0       1       0       0       0  FIL_3_rep2
      0       0       0       0       0       0       0       0       0       1       0       0       0       0       0       1       0       0  FIL_4_rep2
      0       0       0       0       0       0       0       0       0       0       1       0       0       0       0       0       1       0  FIL_5_rep2
      0       0       0       0       0       0       0       0       0       0       0       1       0       0       0       0       0       1  FIL_6_rep2
      1       0       0       0       0       0       1       0       0       0       0       0       1       0       0       0       0       0  INHIB_1_rep2
      0       1       0       0       0       0       0       1       0       0       0       0       0       1       0       0       0       0  INHIB_2_rep2
      0       0       1       0       0       0       0       0       1       0       0       0       0       0       1       0       0       0  INHIB_3_rep2
      0       0       0       1       0       0       0       0       0       1       0       0       0       0       0       1       0       0  INHIB_4_rep2
      0       0       0       0       1       0       0       0       0       0       1       0       0       0       0       0       1       0  INHIB_5_rep2
      0       0       0       0       0       1       0       0       0       0       0       1       0       0       0       0       0       1  INHIB_6_rep2