2-mers CU 50 bases downstrand from stop codon

[CSV file]

Density of motif

t-test: p=1.57001e-10

Neutral set average density: 0.0561905

Different set average density: 0.0655131

Presence of motif

           motif_present
gene_set    absent present
  different     46     948
  neutral      149    1804

Fisher's exact test: p=0.00168502

Binomial GLM: p=0.00215438

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-2.4792   0.3078   0.3984   0.3984   0.3984  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)    2.49382    0.08524  29.257  < 2e-16 ***
differentTRUE  0.53190    0.17336   3.068  0.00215 ** 
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 1435.9  on 2946  degrees of freedom
Residual deviance: 1425.7  on 2945  degrees of freedom
AIC: 1429.7

Number of Fisher Scoring iterations: 5