3-mers UCU 500 bases upstrand from stop codon

[CSV file]

Density of motif

t-test: p=0.20345

Neutral set average density: 0.0169227

Different set average density: 0.0172918

Presence of motif

           motif_present
gene_set    absent present
  different      0     994
  neutral        4    1949

Fisher's exact test: p=0.30719

Binomial GLM: p=0.991452

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
   Min      1Q  Median      3Q     Max  
-3.519   0.000   0.064   0.064   0.064  

Coefficients:
               Estimate Std. Error z value Pr(>|z|)    
(Intercept)      6.1888     0.5005  12.365   <2e-16 ***
differentTRUE   16.3773  1528.6890   0.011    0.991    
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 60.813  on 2946  degrees of freedom
Residual deviance: 57.518  on 2945  degrees of freedom
AIC: 61.518

Number of Fisher Scoring iterations: 21