cisbp-rna Y37E3.10_M231 50 bases upstrand from poly(A) site

[CSV file]

Density of motif

t-test: p=0.380188

Neutral set average density: 0.000204813

Different set average density: 0.00028169

Presence of motif

           motif_present
gene_set    absent present
  different    980      14
  neutral     1933      20

Fisher's exact test: p=0.365214

Binomial GLM: p=0.357588

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.1684  -0.1684  -0.1435  -0.1435   3.0270  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)    -4.5711     0.2248  -20.34   <2e-16 ***
differentTRUE   0.3226     0.3507    0.92    0.358    
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 371.03  on 2946  degrees of freedom
Residual deviance: 370.21  on 2945  degrees of freedom
AIC: 374.21

Number of Fisher Scoring iterations: 7