cisbp-rna Y37E3.10_M231 50 bases upstrand from start codon

[CSV file]

Density of motif

t-test: p=0.121458

Neutral set average density: 9.21659e-05

Different set average density: 0.000201207

Presence of motif

           motif_present
gene_set    absent present
  different    984      10
  neutral     1944       9

Fisher's exact test: p=0.0909152

Binomial GLM: p=0.0881904

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.1422  -0.1422  -0.0961  -0.0961   3.2802  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)    -5.3753     0.3341 -16.089   <2e-16 ***
differentTRUE   0.7862     0.4611   1.705   0.0882 .  
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 229.55  on 2946  degrees of freedom
Residual deviance: 226.68  on 2945  degrees of freedom
AIC: 230.68

Number of Fisher Scoring iterations: 8