cisbp-rna Y37E3.10_M231 500 bases upstrand from stop codon

[CSV file]

Density of motif

t-test: p=0.735933

Neutral set average density: 0.000351254

Different set average density: 0.00034004

Presence of motif

           motif_present
gene_set    absent present
  different    842     152
  neutral     1650     303

Fisher's exact test: p=0.914148

Binomial GLM: p=0.874223

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.5807  -0.5807  -0.5807  -0.5761   1.9380  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)    -1.6948     0.0625 -27.117   <2e-16 ***
differentTRUE  -0.0171     0.1080  -0.158    0.874    
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 2535.9  on 2946  degrees of freedom
Residual deviance: 2535.9  on 2945  degrees of freedom
AIC: 2539.9

Number of Fisher Scoring iterations: 3