cisbp-rna asd_1_M171 50 bases upstrand from start codon

[CSV file]

Density of motif

t-test: p=0.0793344

Neutral set average density: 4.09626e-05

Different set average density: 0.000140845

Presence of motif

           motif_present
gene_set    absent present
  different    987       7
  neutral     1949       4

Fisher's exact test: p=0.0515989

Binomial GLM: p=0.048319

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.1189  -0.1189  -0.0640  -0.0640   3.5188  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)    -6.1888     0.5005 -12.365   <2e-16 ***
differentTRUE   1.2400     0.6280   1.975   0.0483 *  
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 144.95  on 2946  degrees of freedom
Residual deviance: 140.85  on 2945  degrees of freedom
AIC: 144.85

Number of Fisher Scoring iterations: 9