cisbp-rna asd_2_M046 500 bases upstrand from stop codon

[CSV file]

Density of motif

t-test: p=0.78814

Neutral set average density: 8.60215e-05

Different set average density: 9.05433e-05

Presence of motif

           motif_present
gene_set    absent present
  different    951      43
  neutral     1873      80

Fisher's exact test: p=0.770667

Binomial GLM: p=0.768189

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.2974  -0.2974  -0.2892  -0.2892   2.5279  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)   -3.15327    0.11417 -27.620   <2e-16 ***
differentTRUE  0.05696    0.19324   0.295    0.768    
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 1022.2  on 2946  degrees of freedom
Residual deviance: 1022.1  on 2945  degrees of freedom
AIC: 1026.1

Number of Fisher Scoring iterations: 6