cisbp-rna cey_1_M081 50 bases upstrand from start codon

[CSV file]

Density of motif

t-test: p=0.954756

Neutral set average density: 0.00030722

Different set average density: 0.000301811

Presence of motif

           motif_present
gene_set    absent present
  different    979      15
  neutral     1923      30

Fisher's exact test: p=1

Binomial GLM: p=0.954861

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.1760  -0.1760  -0.1760  -0.1744   2.8961  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)   -4.16044    0.18399 -22.612   <2e-16 ***
differentTRUE -0.01804    0.31866  -0.057    0.955    
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 465.68  on 2946  degrees of freedom
Residual deviance: 465.68  on 2945  degrees of freedom
AIC: 469.68

Number of Fisher Scoring iterations: 7