cisbp-rna cey_1_M081 50 bases downstrand from stop codon

[CSV file]

Density of motif

t-test: p=0.588229

Neutral set average density: 0.000215054

Different set average density: 0.000261569

Presence of motif

           motif_present
gene_set    absent present
  different    981      13
  neutral     1932      21

Fisher's exact test: p=0.586976

Binomial GLM: p=0.57678

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.1623  -0.1623  -0.1470  -0.1470   3.0109  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)    -4.5218     0.2194 -20.610   <2e-16 ***
differentTRUE   0.1982     0.3551   0.558    0.577    
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 371.03  on 2946  degrees of freedom
Residual deviance: 370.73  on 2945  degrees of freedom
AIC: 374.73

Number of Fisher Scoring iterations: 7