cisbp-rna cey_1_M250 50 bases downstrand from stop codon

[CSV file]

Density of motif

t-test: p=0.30275

Neutral set average density: 0.000378904

Different set average density: 0.000503018

Presence of motif

           motif_present
gene_set    absent present
  different    970      24
  neutral     1916      37

Fisher's exact test: p=0.34178

Binomial GLM: p=0.349725

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.2211  -0.2211  -0.1956  -0.1956   2.8165  

Coefficients:
              Estimate Std. Error z value Pr(>|z|)    
(Intercept)    -3.9471     0.1660 -23.783   <2e-16 ***
differentTRUE   0.2478     0.2650   0.935     0.35    
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 593.80  on 2946  degrees of freedom
Residual deviance: 592.95  on 2945  degrees of freedom
AIC: 596.95

Number of Fisher Scoring iterations: 6