cisbp-rna rsp_3_M273 50 bases upstrand from start codon

[CSV file]

Density of motif

t-test: p=0.0832645

Neutral set average density: 3.0722e-05

Different set average density: 0

Presence of motif

           motif_present
gene_set    absent present
  different    994       0
  neutral     1950       3

Fisher's exact test: p=0.555377

Binomial GLM: p=0.99459

Call:
glm(formula = motif_present ~ different, family = binomial, data = daf)

Deviance Residuals: 
    Min       1Q   Median       3Q      Max  
-0.0554  -0.0554  -0.0554   0.0000   3.5996  

Coefficients:
               Estimate Std. Error z value Pr(>|z|)    
(Intercept)     -6.4770     0.5778 -11.210   <2e-16 ***
differentTRUE  -17.0891  2520.3818  -0.007    0.995    
---
Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 47.337  on 2946  degrees of freedom
Residual deviance: 44.866  on 2945  degrees of freedom
AIC: 48.866

Number of Fisher Scoring iterations: 22