IGV tracks - C.albicans AS5_13

Which samples

Total

Peaks called by Tail Tools

Ambiguity due to multi-mapping reads

BAM files (all reads)

Depth of all reads
Depth of 3' ends of poly(A) reads

Less useful:
Depth of poly(A) reads
Depth of 3' ends of all reads

Raw depth
Depth normalized between samples

Forward strand
Reverse strand

Direct links to files to be loaded:

Instructions:

IGV tips:

In View/Preferences/Charts, enable "Continuous Autoscale" and "Show All Features".
Track and chart names can be multi-selected using shift-click and ctrl-click.
For quantitative comparisons between samples, right-click the chart name and "Set Data Range".
Feature tracks are loaded "Collapsed", with features piled on top of each other. Right-click and select "Expanded" to see all features. This is especially important when viewing peaks called by Tail Tools.